Commit 64c1cfbd authored by Jürgen Reuter's avatar Jürgen Reuter
Browse files

Manual update.

parent da4c1c8f
......@@ -18,6 +18,7 @@
<li><a href="/trac/wiki">Wiki Page</a></li>
<li><a href="/news.html">News</a></li>
<li><a href="http://whizard.hepforge.org/tutorials">Tutorials</a></li>
<li><a href="https://whizard.hepforge.org/manual/manual014.html#sec288">Delphes Fast Simulation</a></li>
<li><a href="http://whizard.hepforge.org/talks.html">WHIZARD talks</a></li>
<li><a href="/CHANGES">ChangeLog</a></li>
</ul>
......@@ -27,6 +28,7 @@
<ul>
<li><a href="https://launchpad.net/whizard">Launchpad Support Page</a></li>
<li><a href="https://phab.hepforge.org/diffusion/WHIZARDSVN">Subversion Repository</a></li>
<li><a href="https://gitlab.tp.nt.uni-siegen.de/whizard/public">Public Git Repository</a></li>
<li><a href="https://answers.launchpad.net/whizard">Support Questions</a></li>
<li><a href="https://bugs.launchpad.net/whizard">Bug Tracker</a></li>
</ul>
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......@@ -125,53 +125,52 @@ Hadronization</a>
</li><li><a href="manual012.html#sec270">11.7  Rescanning and recalculating events</a>
</li><li><a href="manual012.html#sec271">11.8  Negative weight events</a>
</li></ul>
</li><li><a href="manual013.html">Chapter 12  User Code Plug-Ins</a>
</li><li><a href="manual013.html">Chapter 12  Internal Data Visualization</a>
<ul>
<li><a href="manual013.html#sec273">12.1  The plug-in mechanism</a>
</li><li><a href="manual013.html#sec274">12.2  Data Types Used for Communication</a>
</li><li><a href="manual013.html#sec275">12.3  User-defined Observables and Functions</a>
</li><li><a href="manual013.html#sec283">12.4  User Code and Static Executables</a>
<li><a href="manual013.html#sec273">12.1  GAMELAN</a>
</li><li><a href="manual013.html#sec275">12.2  Histogram Display</a>
</li><li><a href="manual013.html#sec276">12.3  Plot Display</a>
</li><li><a href="manual013.html#sec277">12.4  Graphs</a>
</li><li><a href="manual013.html#sec278">12.5  Drawing options</a>
</li></ul>
</li><li><a href="manual014.html">Chapter 13  Data Visualization</a>
</li><li><a href="manual014.html">Chapter 13  Fast Detector Simulation and External Analysis</a>
<ul>
<li><a href="manual014.html#sec285">13.1  GAMELAN</a>
</li><li><a href="manual014.html#sec287">13.2  Histogram Display</a>
</li><li><a href="manual014.html#sec288">13.3  Plot Display</a>
</li><li><a href="manual014.html#sec289">13.4  Graphs</a>
</li><li><a href="manual014.html#sec290">13.5  Drawing options</a>
<li><a href="manual014.html#sec286">13.1  Interfacing ROOT</a>
</li><li><a href="manual014.html#sec287">13.2  Interfacing RIVET</a>
</li><li><a href="manual014.html#sec288">13.3  Fast Detector Simulation with DELPHES</a>
</li></ul>
</li><li><a href="manual015.html">Chapter 14  User Interfaces for WHIZARD</a>
<ul>
<li><a href="manual015.html#sec298">14.1  Command Line and <span style="font-family:monospace">SINDARIN</span> Input Files</a>
</li><li><a href="manual015.html#sec299">14.2  WHISH – The <span style="font-family:monospace">WHIZARD</span> Shell/Interactive mode</a>
</li><li><a href="manual015.html#sec300">14.3  Graphical user interface</a>
</li><li><a href="manual015.html#sec301">14.4  WHIZARD as a library</a>
<li><a href="manual015.html#sec290">14.1  Command Line and <span style="font-family:monospace">SINDARIN</span> Input Files</a>
</li><li><a href="manual015.html#sec291">14.2  WHISH – The <span style="font-family:monospace">WHIZARD</span> Shell/Interactive mode</a>
</li><li><a href="manual015.html#sec292">14.3  Graphical user interface</a>
</li><li><a href="manual015.html#sec293">14.4  WHIZARD as a library</a>
</li></ul>
</li><li><a href="manual016.html">Chapter 15  Examples</a>
<ul>
<li><a href="manual016.html#sec303">15.1  <span style="font-style:italic">Z</span> lineshape at LEP I</a>
</li><li><a href="manual016.html#sec304">15.2  <span style="font-style:italic">W</span> pairs at LEP II</a>
</li><li><a href="manual016.html#sec305">15.3  Higgs search at LEP II</a>
</li><li><a href="manual016.html#sec306">15.4  Deep Inelastic Scattering at HERA</a>
</li><li><a href="manual016.html#sec307">15.5  <span style="font-style:italic">W</span> endpoint at LHC</a>
</li><li><a href="manual016.html#sec308">15.6  SUSY Cascades at LHC</a>
</li><li><a href="manual016.html#sec309">15.7  Polarized <span style="font-style:italic">WW</span> at ILC</a>
<li><a href="manual016.html#sec295">15.1  <span style="font-style:italic">Z</span> lineshape at LEP I</a>
</li><li><a href="manual016.html#sec296">15.2  <span style="font-style:italic">W</span> pairs at LEP II</a>
</li><li><a href="manual016.html#sec297">15.3  Higgs search at LEP II</a>
</li><li><a href="manual016.html#sec298">15.4  Deep Inelastic Scattering at HERA</a>
</li><li><a href="manual016.html#sec299">15.5  <span style="font-style:italic">W</span> endpoint at LHC</a>
</li><li><a href="manual016.html#sec300">15.6  SUSY Cascades at LHC</a>
</li><li><a href="manual016.html#sec301">15.7  Polarized <span style="font-style:italic">WW</span> at ILC</a>
</li></ul>
</li><li><a href="manual017.html">Chapter 16  Technical details – Advanced Spells</a>
<ul>
<li><a href="manual017.html#sec311">16.1  Efficiency and tuning</a>
<li><a href="manual017.html#sec303">16.1  Efficiency and tuning</a>
</li></ul>
</li><li><a href="manual018.html">Chapter 17  New External Physics Models</a>
<ul>
<li><a href="manual018.html#sec313">17.1  New physics models via <span style="font-family:monospace">SARAH</span></a>
</li><li><a href="manual018.html#sec319">17.2  New physics models via <span style="font-family:monospace">FeynRules</span></a>
</li><li><a href="manual018.html#sec335">17.3  New physics models via the <span style="font-family:monospace">UFO</span> file format</a>
<li><a href="manual018.html#sec305">17.1  New physics models via <span style="font-family:monospace">SARAH</span></a>
</li><li><a href="manual018.html#sec311">17.2  New physics models via <span style="font-family:monospace">FeynRules</span></a>
</li><li><a href="manual018.html#sec327">17.3  New physics models via the <span style="font-family:monospace">UFO</span> file format</a>
</li></ul>
</li><li><a href="manual019.html">Appendix A  <span style="font-family:monospace">SINDARIN</span> Reference</a>
<ul>
<li><a href="manual019.html#sec337">A.1  Commands and Operators</a>
</li><li><a href="manual019.html#sec338">A.2  Variables</a>
</li><li><a href="manual019.html#sec341">Acknowledgements</a>
<li><a href="manual019.html#sec329">A.1  Commands and Operators</a>
</li><li><a href="manual019.html#sec330">A.2  Variables</a>
</li><li><a href="manual019.html#sec333">Acknowledgements</a>
</li></ul>
</li><li><a href="manual020.html">References</a>
</li></ul>
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......@@ -264,75 +264,68 @@ Hadronization</a>
</li><li class="li-toc"><a href="manual012.html#sec270">11.7  Rescanning and recalculating events</a>
</li><li class="li-toc"><a href="manual012.html#sec271">11.8  Negative weight events</a>
</li></ul>
</li><li class="li-toc"><a href="manual013.html#sec272">Chapter 12  User Code Plug-Ins</a>
</li><li class="li-toc"><a href="manual013.html#sec272">Chapter 12  Internal Data Visualization</a>
<ul class="ftoc2"><li class="li-toc">
<a href="manual013.html#sec273">12.1  The plug-in mechanism</a>
</li><li class="li-toc"><a href="manual013.html#sec274">12.2  Data Types Used for Communication</a>
</li><li class="li-toc"><a href="manual013.html#sec275">12.3  User-defined Observables and Functions</a>
<a href="manual013.html#sec273">12.1  GAMELAN</a>
<ul class="ftoc3"><li class="li-toc">
<a href="manual013.html#sec276">12.3.1  Cut function</a>
</li><li class="li-toc"><a href="manual013.html#sec277">12.3.2  Event-shape function</a>
</li><li class="li-toc"><a href="manual013.html#sec278">12.3.3  Observable</a>
</li><li class="li-toc"><a href="manual013.html#sec279">12.3.4  Examples</a>
<a href="manual013.html#sec274">12.1.1  User-specific changes</a>
</li></ul>
</li><li class="li-toc"><a href="manual013.html#sec283">12.4  User Code and Static Executables</a>
</li><li class="li-toc"><a href="manual013.html#sec275">12.2  Histogram Display</a>
</li><li class="li-toc"><a href="manual013.html#sec276">12.3  Plot Display</a>
</li><li class="li-toc"><a href="manual013.html#sec277">12.4  Graphs</a>
</li><li class="li-toc"><a href="manual013.html#sec278">12.5  Drawing options</a>
</li></ul>
</li><li class="li-toc"><a href="manual014.html#sec284">Chapter 13  Data Visualization</a>
</li><li class="li-toc"><a href="manual014.html#sec285">Chapter 13  Fast Detector Simulation and External Analysis</a>
<ul class="ftoc2"><li class="li-toc">
<a href="manual014.html#sec285">13.1  GAMELAN</a>
<ul class="ftoc3"><li class="li-toc">
<a href="manual014.html#sec286">13.1.1  User-specific changes</a>
</li></ul>
</li><li class="li-toc"><a href="manual014.html#sec287">13.2  Histogram Display</a>
</li><li class="li-toc"><a href="manual014.html#sec288">13.3  Plot Display</a>
</li><li class="li-toc"><a href="manual014.html#sec289">13.4  Graphs</a>
</li><li class="li-toc"><a href="manual014.html#sec290">13.5  Drawing options</a>
<a href="manual014.html#sec286">13.1  Interfacing ROOT</a>
</li><li class="li-toc"><a href="manual014.html#sec287">13.2  Interfacing RIVET</a>
</li><li class="li-toc"><a href="manual014.html#sec288">13.3  Fast Detector Simulation with DELPHES</a>
</li></ul>
</li><li class="li-toc"><a href="manual015.html#sec297">Chapter 14  User Interfaces for WHIZARD</a>
</li><li class="li-toc"><a href="manual015.html#sec289">Chapter 14  User Interfaces for WHIZARD</a>
<ul class="ftoc2"><li class="li-toc">
<a href="manual015.html#sec298">14.1  Command Line and <span style="font-family:monospace">SINDARIN</span> Input Files</a>
</li><li class="li-toc"><a href="manual015.html#sec299">14.2  WHISH – The <span style="font-family:monospace">WHIZARD</span> Shell/Interactive mode</a>
</li><li class="li-toc"><a href="manual015.html#sec300">14.3  Graphical user interface</a>
</li><li class="li-toc"><a href="manual015.html#sec301">14.4  WHIZARD as a library</a>
<a href="manual015.html#sec290">14.1  Command Line and <span style="font-family:monospace">SINDARIN</span> Input Files</a>
</li><li class="li-toc"><a href="manual015.html#sec291">14.2  WHISH – The <span style="font-family:monospace">WHIZARD</span> Shell/Interactive mode</a>
</li><li class="li-toc"><a href="manual015.html#sec292">14.3  Graphical user interface</a>
</li><li class="li-toc"><a href="manual015.html#sec293">14.4  WHIZARD as a library</a>
</li></ul>
</li><li class="li-toc"><a href="manual016.html#sec302">Chapter 15  Examples</a>
</li><li class="li-toc"><a href="manual016.html#sec294">Chapter 15  Examples</a>
<ul class="ftoc2"><li class="li-toc">
<a href="manual016.html#sec303">15.1  <span style="font-style:italic">Z</span> lineshape at LEP I</a>
</li><li class="li-toc"><a href="manual016.html#sec304">15.2  <span style="font-style:italic">W</span> pairs at LEP II</a>
</li><li class="li-toc"><a href="manual016.html#sec305">15.3  Higgs search at LEP II</a>
</li><li class="li-toc"><a href="manual016.html#sec306">15.4  Deep Inelastic Scattering at HERA</a>
</li><li class="li-toc"><a href="manual016.html#sec307">15.5  <span style="font-style:italic">W</span> endpoint at LHC</a>
</li><li class="li-toc"><a href="manual016.html#sec308">15.6  SUSY Cascades at LHC</a>
</li><li class="li-toc"><a href="manual016.html#sec309">15.7  Polarized <span style="font-style:italic">WW</span> at ILC</a>
</li></ul>
</li><li class="li-toc"><a href="manual017.html#sec310">Chapter 16  Technical details – Advanced Spells</a>
<a href="manual016.html#sec295">15.1  <span style="font-style:italic">Z</span> lineshape at LEP I</a>
</li><li class="li-toc"><a href="manual016.html#sec296">15.2  <span style="font-style:italic">W</span> pairs at LEP II</a>
</li><li class="li-toc"><a href="manual016.html#sec297">15.3  Higgs search at LEP II</a>
</li><li class="li-toc"><a href="manual016.html#sec298">15.4  Deep Inelastic Scattering at HERA</a>
</li><li class="li-toc"><a href="manual016.html#sec299">15.5  <span style="font-style:italic">W</span> endpoint at LHC</a>
</li><li class="li-toc"><a href="manual016.html#sec300">15.6  SUSY Cascades at LHC</a>
</li><li class="li-toc"><a href="manual016.html#sec301">15.7  Polarized <span style="font-style:italic">WW</span> at ILC</a>
</li></ul>
</li><li class="li-toc"><a href="manual017.html#sec302">Chapter 16  Technical details – Advanced Spells</a>
<ul class="ftoc2"><li class="li-toc">
<a href="manual017.html#sec311">16.1  Efficiency and tuning</a>
<a href="manual017.html#sec303">16.1  Efficiency and tuning</a>
</li></ul>
</li><li class="li-toc"><a href="manual018.html#sec312">Chapter 17  New External Physics Models</a>
</li><li class="li-toc"><a href="manual018.html#sec304">Chapter 17  New External Physics Models</a>
<ul class="ftoc2"><li class="li-toc">
<a href="manual018.html#sec313">17.1  New physics models via <span style="font-family:monospace">SARAH</span></a>
<a href="manual018.html#sec305">17.1  New physics models via <span style="font-family:monospace">SARAH</span></a>
<ul class="ftoc3"><li class="li-toc">
<a href="manual018.html#sec314">17.1.1  <span style="font-family:monospace">WHIZARD</span>/<span style="font-family:monospace">O’Mega</span> model files from <span style="font-family:monospace">SARAH</span></a>
</li><li class="li-toc"><a href="manual018.html#sec317">17.1.2  Linking <span style="font-family:monospace">SPheno</span> and <span style="font-family:monospace">WHIZARD</span></a>
</li><li class="li-toc"><a href="manual018.html#sec318">17.1.3  BSM Toolbox</a>
<a href="manual018.html#sec306">17.1.1  <span style="font-family:monospace">WHIZARD</span>/<span style="font-family:monospace">O’Mega</span> model files from <span style="font-family:monospace">SARAH</span></a>
</li><li class="li-toc"><a href="manual018.html#sec309">17.1.2  Linking <span style="font-family:monospace">SPheno</span> and <span style="font-family:monospace">WHIZARD</span></a>
</li><li class="li-toc"><a href="manual018.html#sec310">17.1.3  BSM Toolbox</a>
</li></ul>
</li><li class="li-toc"><a href="manual018.html#sec319">17.2  New physics models via <span style="font-family:monospace">FeynRules</span></a>
</li><li class="li-toc"><a href="manual018.html#sec311">17.2  New physics models via <span style="font-family:monospace">FeynRules</span></a>
<ul class="ftoc3"><li class="li-toc">
<a href="manual018.html#sec320">17.2.1  Installation and Usage of the <span style="font-family:monospace">WHIZARD</span>-<span style="font-family:monospace">FeynRules</span> interface</a>
</li><li class="li-toc"><a href="manual018.html#sec326">17.2.2  Options of the <span style="font-family:monospace">WHIZARD</span>-<span style="font-family:monospace">FeynRules</span> interface</a>
</li><li class="li-toc"><a href="manual018.html#sec327">17.2.3  Validation of the interface</a>
</li><li class="li-toc"><a href="manual018.html#sec328">17.2.4  Examples for the <span style="font-family:monospace">WHIZARD</span>-/<span style="font-family:monospace">FeynRules</span> interface</a>
<a href="manual018.html#sec312">17.2.1  Installation and Usage of the <span style="font-family:monospace">WHIZARD</span>-<span style="font-family:monospace">FeynRules</span> interface</a>
</li><li class="li-toc"><a href="manual018.html#sec318">17.2.2  Options of the <span style="font-family:monospace">WHIZARD</span>-<span style="font-family:monospace">FeynRules</span> interface</a>
</li><li class="li-toc"><a href="manual018.html#sec319">17.2.3  Validation of the interface</a>
</li><li class="li-toc"><a href="manual018.html#sec320">17.2.4  Examples for the <span style="font-family:monospace">WHIZARD</span>-/<span style="font-family:monospace">FeynRules</span> interface</a>
</li></ul>
</li><li class="li-toc"><a href="manual018.html#sec335">17.3  New physics models via the <span style="font-family:monospace">UFO</span> file format</a>
</li><li class="li-toc"><a href="manual018.html#sec327">17.3  New physics models via the <span style="font-family:monospace">UFO</span> file format</a>
</li></ul>
</li><li class="li-toc"><a href="manual019.html#sec336">Appendix A  <span style="font-family:monospace">SINDARIN</span> Reference</a>
</li><li class="li-toc"><a href="manual019.html#sec328">Appendix A  <span style="font-family:monospace">SINDARIN</span> Reference</a>
<ul class="ftoc2"><li class="li-toc">
<a href="manual019.html#sec337">A.1  Commands and Operators</a>
</li><li class="li-toc"><a href="manual019.html#sec338">A.2  Variables</a>
<a href="manual019.html#sec329">A.1  Commands and Operators</a>
</li><li class="li-toc"><a href="manual019.html#sec330">A.2  Variables</a>
<ul class="ftoc3"><li class="li-toc">
<a href="manual019.html#sec339">A.2.1  Rebuild Variables</a>
</li><li class="li-toc"><a href="manual019.html#sec340">A.2.2  Standard Variables</a>
<a href="manual019.html#sec331">A.2.1  Rebuild Variables</a>
</li><li class="li-toc"><a href="manual019.html#sec332">A.2.2  Standard Variables</a>
</li></ul>
</li></ul>
</li></ul>
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......@@ -97,10 +97,7 @@ for their extension. After that, the next chapter discusses parton
showering, matching and hadronization as well as options for event
normalizations and supported event formats. Also weighted event
generation is explained along the lines with options for negative
weights. Then, in Chap. <a href="manual013.html#chap%3Auser">12</a>, options for user to plug-in
self-written code into the <span style="font-family:monospace">WHIZARD</span> framework are detailed, e.g. for
observables, selections and cut functions, or for spectra and
structure functions. Also, static executables are discussed.</p><p>Chap. <a href="manual014.html#chap%3Avisualization">13</a> is a stand-alone documentation of
weights.</p><p>Chap. <a href="manual013.html#chap%3Avisualization">12</a> is a stand-alone documentation of
GAMELAN, the interal graphics support for the visualization of data
and analysis. The next chapter, Chap. <a href="manual015.html#chap%3Auserint">14</a> details user
interfaces: how to use more options of the <span style="font-family:monospace">WHIZARD</span> command on the
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......@@ -176,9 +176,8 @@ especially the the early version of the <span style="font-family:monospace">gfor
some bugs. <span style="font-family:monospace">gfortran</span> 6.5.0 has a severe regression and cannot
be used.
</li><li class="li-itemize"><span style="font-family:monospace">nagfor</span> (NAG). You will need version 6.2 or higher.
</li><li class="li-itemize"><span style="font-family:monospace">ifort</span> (Intel). You will need version 17.0.4 or
higher. Version 19.0.0 unfortunately has a severe regression and
cannot be used.
</li><li class="li-itemize"><span style="font-family:monospace">ifort</span> (Intel). You will need version 19.0.2 or
higher
</li></ul>
<h3 id="sec14" class="subsection">2.2.5  LHAPDF</h3>
<p>
......@@ -337,7 +336,7 @@ respectively. After configuration, do <span style="font-family:monospace">make</
<span style="font-family:monospace">make check</span> (which might sometimes fail for non-standard values
of momentum and length), and finally <span style="font-family:monospace">make install</span>.</p><p>The latest version of <span style="font-family:monospace">HepMC</span> (2.6.10) as well as the new relase
series use <span style="font-family:monospace">cmake</span> for their build process. For more
information, confer the <span style="font-family:monospace">HepMC</span> webpage.</p><p>A <span style="font-family:monospace">WHIZARD</span> configuration for HepMC looks like this:
information, confer the <span style="font-family:monospace">HepMC</span> webpage.</p><p>A <span style="font-family:monospace">WHIZARD</span> configuration for <span style="font-family:monospace">HepMC</span> looks like this:
<span style="font-size:small">
</span></p><pre class="verbatim"><span style="font-size:small"> configure: --------------------------------------------------------------
configure: --- HepMC ---
......@@ -354,7 +353,31 @@ would not find it, set the environment variable <span style="font-family:monospa
the correct installation path when configuring <span style="font-family:monospace">WHIZARD</span>. Furthermore,
the environment variable <span style="font-family:monospace">CXXFLAGS</span> allows you to set specific
<span style="font-family:monospace">C/C++</span> preprocessor flags, e.g. non-standard include paths for
header files.</p>
header files.</p><p>A typical configuration of <span style="font-family:monospace">HepMC3</span> will look like this:
<span style="font-size:small">
</span></p><pre class="verbatim"><span style="font-size:small">configure: --------------------------------------------------------------
configure: --- ROOT ---
configure:
checking for root-config... /usr/local/bin/root-config
checking for root... /usr/local/bin/root
checking for rootcint... /usr/local/bin/rootcint
checking for dlopen in -ldl... (cached) yes
configure: --------------------------------------------------------------
configure: --- HepMC ---
configure:
checking for HepMC3-config... /usr/local/bin/HepMC3-config
checking if HepMC3 is built with ROOT interface... yes
checking if HepMC3 is functional... yes
checking for HepMC3... yes
checking the HepMC3 version... 3.02.01
configure: --------------------------------------------------------------
</span></pre><p><span style="font-size:small">
</span>
As can be seen, <span style="font-family:monospace">WHIZARD</span> will check for the <span style="font-family:monospace">ROOT</span> environment as
well as whether <span style="font-family:monospace">HepMC3</span> has been built with support for the
<span style="font-family:monospace">ROOT</span> and <span style="font-family:monospace">RootTree</span> writer classes. This is an easy option to
use <span style="font-family:monospace">WHIZARD</span> to write out <span style="font-family:monospace">ROOT</span> events. For more information see
Sec. <a href="manual014.html#sec%3Aroot">13.1</a>. </p>
<h3 id="sec17" class="subsection">2.2.8  PYTHIA8</h3>
<p>
<a id="sec:pythia8"></a></p><p><em>NOTE: This is at the moment not yet supported, but merely a stub
......
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......@@ -483,7 +483,7 @@ useful for pretty-printing single histograms or plots. Example:
} = hist1 &amp; hist2
</pre> </td></tr>
</table><p>
See Sec. <a href="manual014.html#sec%3Agraphs">13.4</a>.</p>
See Sec. <a href="manual013.html#sec%3Agraphs">12.4</a>.</p>
<h4 id="sec88" class="subsubsection">write_analysis</h4>
<blockquote class="quote"><div class="flushleft"><span style="font-family:monospace">
write_analysis (</span><span style="font-family:monospace"><span style="font-style:italic">analysis-objects</span></span><span style="font-family:monospace">)
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